Clinical Domain Label Catalog¶

Disclaimer: This catalog is generated from the packaged zero-shot domain label map and canonical label metadata. Labels, policy classes, risk levels, coding system hints, and fixture pointers are for offline evaluation and review workflow planning only; they are not clinical guidance and must not be used to infer diagnosis, treatment, coding, or coverage decisions.

Biomedical¶

Clinical¶

Genomic¶

Genomic Variant¶

Finance¶

Legal¶

News¶

Ecommerce¶

Cybersecurity¶

Chemistry¶

Organism¶

Education¶

Social¶

Public Health¶

Disease¶

Pharmaceutical¶

Oncology¶

Oncology Staging¶

Alignment: TNM and tumor-descriptor labels capture descriptors explicitly written in an oncology note for descriptive extraction and human review only. OpenMed does not compute a stage group, apply AJCC/UICC staging rules, infer prognosis, recommend treatment, or make a medical decision, and does not bundle staging manuals or proprietary tables.

Anatomy¶

Genomics¶

Chemical¶

Species¶

Protein¶

Pathology¶

Pathology Histology¶

Alignment: The display labels describe pathology-report content for offline extraction and human review only. They do not grade or stage a tumor, apply diagnostic rules, recommend treatment, or make clinical decisions.

Hematology¶

Lab¶

Cardiology¶

Microbiology¶

Dermatology¶

Wound Assessment¶

Alignment: This map is intentionally distinct from the dermatology lesion map: it captures wound-care descriptors as written for nursing and surgical review. It does not infer wound staging, predict healing, recommend treatment, or make clinical decisions.

Ophthalmology¶

Radiology¶

Generic¶

Anesthesia¶

Nutrition Diet¶

Endocrinology¶

Gastroenterology¶

Nephrology Renal¶

Immunization¶

Alignment: The display labels are shaped for the planned OM-138 FHIR Immunization exporter: VaccineName maps to vaccineCode, DoseNumber to protocolApplied.doseNumber[x], AdministrationRoute to route, AdministrationSite to site, VaccineLot to lotNumber, AdministrationDate to occurrence[x], and VaccineSeries to protocolApplied.series. This is extraction metadata only; it does not create exporter, recommendation, dosing, or scheduling logic.

Allergy Intolerance¶

Alignment: The display labels are shaped for the planned OM-138 FHIR AllergyIntolerance exporter: Allergen maps to code, ReactionManifestation to reaction.manifestation, ReactionSeverity to reaction.severity, Criticality to criticality, AllergyType to type, and OnsetContext to onset. This is descriptive extraction metadata only; it is not a contraindication check, drug-allergy cross-check, recommendation, or clinical decision logic.

Pulmonology¶

Pediatrics Growth¶

Procedures¶

Nursing Observation¶

Medical Device¶

Alignment: The display labels are descriptive extraction metadata for a planned FHIR Device projection: DeviceType, DeviceIdentifier, Manufacturer, ModelNumber, ImplantSite, and DeviceStatus describe device mentions without UDI lookup or decoding or contacting GUDID or any other network service. DeviceIdentifier remains a HIPAA device identifier and requires human review; this catalog is not clinical guidance and does not make device, treatment, or safety decisions.

Functional Status¶

Alignment: This map captures documented activities of daily living, assistance, mobility, assistive-device mentions, functional-scale references, and cognitive status for offline extraction review. It does not score Barthel or Katz scales, infer care needs, recommend a disposition, or make clinical decisions.

Obstetrics Gynecology¶

Alignment: The display labels cover pregnancy and reproductive-health concepts for structured extraction only. This metadata does not compute gestational age, score risk, infer diagnosis, recommend care, or bundle restricted terminology; human review remains required.

Substance Use History¶

Alignment: This map captures explicit substance, use-status, quantity, frequency, duration, quit-date, and pack-year spans for offline extraction and human review. It is complementary to, not a replacement for, the existing SDOH determinant extractor and does not classify risk, compute pack-years, recommend care, or make clinical decisions.

Immunology¶

Mental Health¶

Alignment: Substance-use and SDOH (social-determinants-of-health) entities are out of scope for this domain and remain owned by OM-056. Mental-health spans are high-sensitivity content for redaction review; this catalog is extraction metadata only and does not make clinical decisions.

Dentistry¶

Offline Coverage Evaluation¶

The fixture-backed clinical domains are checked by the aggregate-only clinical_domain_coverage suite. Run openmed benchmark domain-coverage --json --output domain-coverage.json from the repository root to verify that every shipped display label has a non-empty synthetic span and that fixture labels resolve to the canonical label catalog.

The gate fails on a missing fixture, an orphan label, an invalid offset, or a label with no span. Reports contain domain names, labels, offsets, and counts only; fixture text is never emitted.